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:Using Java to find the needle in the DNA haystack
Using Java to find the needle in the DNA haystack
Mar 14, 2008, 07 :00 UTC (0 Talkback[s]) (3407 reads)

(Other stories by Paul Reiners)

[ Thanks to Nobody for this link. ]

"You take a problem that could be solved recursively from the top down and solve it iteratively from the bottom up instead. You store your intermediate results in a table for later use; otherwise, you would end up computing them repeatedly — an inefficient algorithm. But dynamic programming is usually applied to optimization problems like the rest of this article's examples, rather than to problems like the Fibonacci problem. The next example is a string algorithm, like those commonly used in computational biology."

Complete Story

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IT-Analysis.com: Open Source in Bioinformatics(Jan 04, 2002)



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